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Pull requests: nf-core/modules

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Pull requests list

Swap bbmap/align to nf-test and add stub
#7278 opened Jan 8, 2025 by SPPearce Loading…
[DO NOT MERGE] Test skip step
#7274 opened Jan 7, 2025 by mashehu Loading…
Add filter step to CI to exclude some tests for some profiles
#7273 opened Jan 7, 2025 by mashehu Loading…
3
Baysor module
#7270 opened Jan 7, 2025 by sebgoti Loading…
6
Added nftests to gseagsea
#7266 opened Dec 31, 2024 by nschcolnicov Loading…
17 tasks
10
Added nf-tests to gprofile2/gost
#7265 opened Dec 27, 2024 by nschcolnicov Loading…
17 tasks
2
Add nftests to validatefomcomponents and staticdifferential
#7264 opened Dec 26, 2024 by nschcolnicov Loading…
17 tasks
1
Add new module decoupler/progeny
#7263 opened Dec 26, 2024 by atrigila • Draft
17 tasks
2
Added immunedeconv module
#7262 opened Dec 24, 2024 by nschcolnicov Loading…
17 tasks
PINTS Updates
#7261 opened Dec 23, 2024 by edmundmiller Loading…
@edmundmiller
modify custom/filterdifferentialtable to allow >=/<=
#7258 opened Dec 20, 2024 by suzannejin Loading…
15 of 17 tasks
1
Fix: arriba: rename argument and reorder alphabetically
#7255 opened Dec 20, 2024 by rannick Loading…
17 tasks
add subworkflow for functional enrichment analysis
#7254 opened Dec 20, 2024 by suzannejin • Draft
17 tasks
ADD CATPACK_DOWNLOAD
#7253 opened Dec 19, 2024 by jfy133 Loading…
17 tasks
1
10
New kma module new module Adding a new module WIP Work in progress
#7251 opened Dec 19, 2024 by Krannich479 Loading…
9 of 14 tasks
@Krannich479
16
READY FOR REVIEW: Adapt output declarations
#7244 opened Dec 18, 2024 by simoxb Loading…
13 tasks
2
Add functionality for --unknown-slide in spaceranger/count
#7233 opened Dec 17, 2024 by fasterius Loading…
1 task done
9
port mmseqs/tsv2exprofiledb to nf-test
#7232 opened Dec 17, 2024 by famosab Loading…
17 tasks
try porting mmseqs/search to nf-test
#7231 opened Dec 17, 2024 by famosab Loading…
17 tasks
5
added basicpy nftest
#7228 opened Dec 16, 2024 by kbestak Loading…
10 of 14 tasks
1
3
Move Changes action locally
#7223 opened Dec 13, 2024 by edmundmiller • Draft
@edmundmiller
4
DUMMY DELETE ME: Test if UNTAR fails on self_hosted runners
#7216 opened Dec 13, 2024 by jfy133 • Draft
17 tasks
Remove compressed flag from all mmseqs modules
#7211 opened Dec 12, 2024 by jasmezz Loading…
2 of 17 tasks
5
Add nftests custom modules
#7201 opened Dec 11, 2024 by nschcolnicov Loading…
17 tasks
39
Fix abritamr/run ready to merge
#7176 opened Dec 7, 2024 by sateeshperi Loading…
@sateeshperi
6
ProTip! no:milestone will show everything without a milestone.